| Protein ZmTHX6 | |
|---|---|
|
ZmTHX6 is a protein in the Trihelix family.
|
|
| Information | |
| TF Name: | ZmTHX6 |
| Species: | Maize |
| TF Family: | Trihelix |
| Gene Name(Synonym): | THX6 |
| Uniprot ID: | B4FUY7 |
| Subgenome: | 2 |
Protein ZmTHX6
ZmTHX6 is a protein in the Trihelix family.
| Overview of domains present in v5 transcripts | |||
|---|---|---|---|
| PF10545 | PF13837 | Trihelix | |
| Zm00001eb361590_T001 |  | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d011730 | DAPseq |  |
sequence | fimo | position |
| Zm00001d011730 | DAPseq |  |
sequence | fimo | position |
| Zm00001d011730 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d011730 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmTHX6 is the regulator
Interactions where ZmTHX6 is the target
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Zm00001eb361590_T001 from maize genome v5
Amino Acid Sequence
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MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF13837 |
|
| Trihelix |
|
| PF10545 |
|
| PF13837 |
|
| PF10545 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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TATCTGTTTCTCCGTATGCAGTTGC...
TATCTGTTTCTCCGTATGCAGTTGCAGTACATTGGCTACAGTGTCACGGACTCGCGGTGAGCCCCACGGAGGAACGGGCTACCCAAACTCGCCGGATTCCTACCTGTCCCGGCCAACCCACCTCGCCGAACCACTCCACCAACCACGAACCTGAAACCCTAGCCACGCCCATGAGCGACGACGCGACCGCCGCCGCGCCCTCTTCGCCGTCGACCTCCCCTTCCCCATCCTCTGCTTCCTCATCAGGCGCCTCCCCGTCGCCTTCCTCCCCGCGCACCAAGCGCCGCCGCACCGACCGGTACGCTCTCGGTTTCGAGTTCGCCCCGCGACTCGCGCCCTACGAACTCCCTGAGGAACCGCTCCCCGACAAGCACAAGCGCTCCTGGCCCAACTGGACGGAGCGCTCCACCTTGGCTCTCCTCGACGCCTGGGGCGACAGCTTCGTCCGCGCGGGGCGCAGCATCATCCGCGCCGACGAGTGGCTCGAGGTCGCCCGCCTCGTGTGCGCCGCCGTGGGCCGTCCCGCGGGGTATTTCTCTGATGCGCAGTGCCGCAACCGAGTGGACACGCTTAGGAAGAAGTTTAAGAAGGAGAGGGAGAGAGCGCGCCGTGCCGCGCGCCGCTCCGGTCCCTCCCCTTCCAAATGGGTTTATTACGACAAGATGGTGGCAATTCTGTGCCCGACCCCGCCTCCGCTGCCGACCCTGCCTCCGCCTGCCCGTCCCCCTCCGCTGCCTCTCCAGTTGCTGCCTCTGGTCGCAAAGCGCCGCCGCGACAGGCAGCCAGCGCGGCGCTTTCAGTGGGGGATGAAAGCTCCTGAGCGTCTTCTTGGTGGTGCCGGAGACGTCGTAGGTCCCAGGGTTTCAGGGTCAGGTGCGAAGTTGGGTGAACTTGGACCGCAGAAAAATAGTGCTGTTCAAGGGAAGCGGAATGGTTTCATGGCCCTCACAGAGTCAATTCAGAAGTTTGAGGAGGCTTTTGCGAGGATGGAGAGTAGCAAGAGGCAGCACATGGTGAAGGTGGAGCAAATGAGGAGGGATTTGCAAAGGGACCTAGATGCAAAGTGGAGGGAGATATTGGAGAAGGCGCAAGCGGAGATTGGTCGCCTTAGTAATGAGGATGGGGATGAACATGATGTGGACGAAGATGGGGATGTTGGCGATGGTAAGAGATTGGAGGGTGGTGATGAGCAAAACAATGGTGCTATGGATGCTTCTCCTTAGCATATAGCCTAGATGCTTACAAAATGAGGAACAAAATTGGGGTTATCATGTCGATAGATGAATCCACATGATAGACATGTGGTTATGATTAACTCCGTAGCTGCTGATATTAGTATTATTGTATAATTCTCATATGTGTTTCTTTTTTTTTACTCCGCAATGCTAAGCAAAAGATTACTGCTATTTTGGTTACTGTACATAGCTATTTGCTTACCGACGTGTGTTTTCAAGATAATAATATCATTTGGTCGCTCTTA
GRMZM2G339957_T01 from maize genome v3
Amino Acid Sequence
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MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
Nucleotide Sequence
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ATTGGCATCTATCTGTTTCTCCGTA...
ATTGGCATCTATCTGTTTCTCCGTATGCAGTTGCAGTACATTGGCTACAGTGTCACGGACTCGCGGTGAGCCCCACGGAGGAACGGGCTACCCAAACTCGCCGGATTCCTACCTGTCCCGGCCAACCCACCTCGCCGAACCACTCCACCAACCACGAACCTGAAACCCTAGCCACGCCCATGAGCGACGACGCGACCGCCGCCGCGCCCTCTTCGCCGTCGACCTCCCCTTCCCCATCCTCTGCTTCCTCATCAGGCGCCTCCCCGTCGCCTTCCTCCCCGCGCACCAAGCGCCGCCGCACCGACCGGTACGCTCTCGGTTTCGAGTTCGCCCCGCGACTCGCGCCCTACGAACTCCCTGAGGAACCGCTCCCCGACAAGCACAAGCGCTCCTGGCCCAACTGGACGGAGCGCTCCACCTTGGCTCTCCTCGACGCCTGGGGCGACAGCTTCGTCCGCGCGGGGCGCAGCATCATCCGCGCCGACGAGTGGCTCGAGGTCGCCCGCCTCGTGTGCGCCGCCGTGGGCCGTCCCGCGGGGTATTTCTCTGATGCGCAGTGCCGCAACCGAGTGGACACGCTTAGGAAGAAGTTTAAGAAGGAGAGGGAGAGAGCGCGCCGTGCCGCGCGCCGCTCCGGTCCCTCCCCTTCCAAATGGGTTTATTACGACAAGATGGTGGCAATTCTGTGCCCGACCCCGCCTCCGCTGCCGACCCTGCCTCCGCCTGCCCGTCCCCCTCCGCTGCCTCTCCAGTTGCTGCCTCTGGTCGCAAAGCGCCGCCGCGACAGGCAGCCAGCGCGGCGCTTTCAGTGGGGGATGAAAGCTCCTGAGCGTCTTCTTGGTGGTGCCGGAGACGTCGTAGGTCCCAGGGTTTCAGGGTCAGGTGCGAAGTTGGGTGAACTTGGACCGCAGAAAAATAGTGCTGTTCAAGGGAAGCGGAATGGTTTCATGGCCCTCACAGAGTCAATTCAGAAGTTTGAGGAGGCTTTTGCGAGGATGGAGAGTAGCAAGAGGCAGCACATGGTGAAGGTGGAGCAAATGAGGAGGGATTTGCAAAGGGACCTAGATGCAAAGTGGAGGGAGATATTGGAGAAGGCGCAAGCGGAGATTGGTCGCCTTAGTAATGAGGATGGGGATGAACATGATGTGGACGAAGATGGGGATGTTGGCGATGGTAAGAGATTGGAGGGTGGTGATGAGCAAAACAATGGTGCTATGGATGCTTCTCCTTAGCATATAGCCTAGATGCTTACAAAATGAGGAACAAAATTGGGGTTATCATGTCGATAGATGAATCCACATGATAGACATGTGGTTATGATTAACTCCGTAGCTGCTGATATTAGTATTATTGTATAATTCTCATATGTGTTTCTTTTTTTTTACTCCGCAATGCTAAGCAAAAGATTACTGCTATTTTGGTTACTGTACATAGCTATTTGCTTACCGACGTGTGTTTTCAAGATAATAATATCATTTGGTCGCTCTTAGTTATAA
Zm00001d011730_T001 from maize genome v4
Amino Acid Sequence
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MSDDATAAAPSSPSTSPSPSSASSSGASPSPSSPRTKRRRTDRYALGFEFAPRLAPYELPEEPLPDKHKRSWPNWTERST
LALLDAWGDSFVRAGRSIIRADEWLEVARLVCAAVGRPAGYFSDAQCRNRVDTLRKKFKKERERARRAARRSGPSPSKWV
YYDKMVAILCPTPPPLPTLPPPARPPPLPLQLLPLVAKRRRDRQPARRFQWGMKAPERLLGGAGDVVGPRVSGSGAKLGE
LGPQKNSAVQGKRNGFMALTESIQKFEEAFARMESSKRQHMVKVEQMRRDLQRDLDAKWREILEKAQAEIGRLSNEDGDE
HDVDEDGDVGDGKRLEGGDEQNNGAMDASP
Nucleotide Sequence
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ATGAGCGACGACGCGACCGCCGCCG...
ATGAGCGACGACGCGACCGCCGCCGCGCCCTCTTCGCCGTCGACCTCCCCTTCCCCATCCTCTGCTTCCTCATCAGGCGCCTCCCCGTCGCCTTCCTCCCCGCGCACCAAGCGCCGCCGCACCGACCGGTACGCTCTCGGTTTCGAGTTCGCCCCGCGACTCGCGCCCTACGAACTCCCTGAGGAACCGCTCCCCGACAAGCACAAGCGCTCCTGGCCCAACTGGACGGAGCGCTCCACCTTGGCTCTCCTCGACGCCTGGGGCGACAGCTTCGTCCGCGCGGGGCGCAGCATCATCCGCGCCGACGAGTGGCTCGAGGTCGCCCGCCTCGTGTGCGCCGCCGTGGGCCGTCCCGCGGGGTATTTCTCTGATGCGCAGTGCCGCAACCGAGTGGACACGCTTAGGAAGAAGTTTAAGAAGGAGAGGGAGAGAGCGCGCCGTGCCGCGCGCCGCTCCGGTCCCTCCCCTTCCAAATGGGTTTATTACGACAAGATGGTGGCAATTCTGTGCCCGACCCCGCCTCCGCTGCCGACCCTGCCTCCGCCTGCCCGTCCCCCTCCGCTGCCTCTCCAGTTGCTGCCTCTGGTCGCAAAGCGCCGCCGCGACAGGCAGCCAGCGCGGCGCTTTCAGTGGGGGATGAAAGCTCCTGAGCGTCTTCTTGGTGGTGCCGGAGACGTCGTAGGTCCCAGGGTTTCAGGGTCAGGTGCGAAGTTGGGTGAACTTGGACCGCAGAAAAATAGTGCTGTTCAAGGGAAGCGGAATGGTTTCATGGCCCTCACAGAGTCAATTCAGAAGTTTGAGGAGGCTTTTGCGAGGATGGAGAGTAGCAAGAGGCAGCACATGGTGAAGGTGGAGCAAATGAGGAGGGATTTGCAAAGGGACCTAGATGCAAAGTGGAGGGAGATATTGGAGAAGGCGCAAGCGGAGATTGGTCGCCTTAGTAATGAGGATGGGGATGAACATGATGTGGACGAAGATGGGGATGTTGGCGATGGTAAGAGATTGGAGGGTGGTGATGAGCAAAACAATGGTGCTATGGATGCTTCTCCTTAG
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